Uses of Interface
gate.AnnotationSet

Packages that use AnnotationSet
com.ontotext.gate.gazetteer   
debugger.gui.actions.editor   
debugger.gui.actions.resources   
debugger.gui.debugging   
debugger.resources   
debugger.resources.pr   
gate This package contains the public interface to the GATE Java API.  
gate.annotation   
gate.corpora   
gate.creole   
gate.creole.annotdelete   
gate.creole.annotransfer   
gate.creole.coref   
gate.creole.dumpingPR   
gate.creole.ml   
gate.creole.nerc   
gate.creole.orthomatcher   
gate.email   
gate.event   
gate.gui   
gate.gui.docview   
gate.html   
gate.jape   
gate.persist   
gate.util   
gate.xml   
 

Uses of AnnotationSet in com.ontotext.gate.gazetteer
 

Methods in com.ontotext.gate.gazetteer with parameters of type AnnotationSet
private  void TestHashGazetteer.dumpAnnotationSet(AnnotationSet marks)
          dumps the annotation set to system ouput
private  boolean TestHashGazetteer.EqualAnnotationSets(AnnotationSet marks)
          Tests whether the annotation set has the same elements as statet in DESIRED_ANNOTATIONS
 

Uses of AnnotationSet in debugger.gui.actions.editor
 

Methods in debugger.gui.actions.editor with parameters of type AnnotationSet
private  int ShowRuleInfoAction.getSlashNAmount(int offset, AnnotationSet as)
           
 

Uses of AnnotationSet in debugger.gui.actions.resources
 

Methods in debugger.gui.actions.resources with parameters of type AnnotationSet
private  int RuleSelectedAction.getSlashNAmount(int offset, AnnotationSet as)
           
 

Uses of AnnotationSet in debugger.gui.debugging
 

Fields in debugger.gui.debugging declared as AnnotationSet
private  AnnotationSet JapeDebuggingPanel.currentAnnotationCut
           
private  AnnotationSet TraceHistoryPanel.currentAnnotationCut
           
 

Methods in debugger.gui.debugging with parameters of type AnnotationSet
private  JComponent JapeDebuggingPanel.createAnnotationPanel(AnnotationSet annotations, String annotationsType, RuleTrace ruleTrace, boolean withHighlighting)
          This method creates a panel with annotations of the given input type, which are contained in a selected interval.
private  JComponent TraceHistoryPanel.createAnnotationPanel(AnnotationSet annotations, String annotationsType, RuleTrace ruleTrace, boolean withHighlighting)
          This method creates a panel with annotations of the given input type, which are contained in a selected interval.
 

Uses of AnnotationSet in debugger.resources
 

Fields in debugger.resources declared as AnnotationSet
private  AnnotationSet PhaseController.ruleAnnotations
           
 

Methods in debugger.resources with parameters of type AnnotationSet
 void PhaseController.RuleMatched(SPTLock sptLock, SinglePhaseTransducer spt, RightHandSide rhs, Document document, HashMap bindings, AnnotationSet inputAS, AnnotationSet outputAS)
           
 void PhaseController.RuleFinished(SPTLock sptLock, SinglePhaseTransducer spt, RightHandSide rhs, Document document, HashMap bindings, AnnotationSet inputAS, AnnotationSet outputAS)
           
 

Uses of AnnotationSet in debugger.resources.pr
 

Fields in debugger.resources.pr declared as AnnotationSet
private  AnnotationSet RuleTrace.annotations
           
 

Methods in debugger.resources.pr that return AnnotationSet
 AnnotationSet RuleAnnotationHistory.getAnnotationSet(Document document)
           
 AnnotationSet RuleTrace.getAnnotations()
           
 AnnotationSet TraceContainer.getPhaseCut(PhaseModel pm)
           
 

Methods in debugger.resources.pr with parameters of type AnnotationSet
 boolean RuleAnnotationHistory.addAnnotationSet(AnnotationSet annSet)
           
private  Annotation RuleModel.neededAnnotation(AnnotationSet annSet, String target)
           
 void RuleTrace.setAnnotations(AnnotationSet annotations)
           
 void TraceContainer.putPhaseCut(SinglePhaseTransducer spt, AnnotationSet annotations)
           
 

Uses of AnnotationSet in gate
 

Methods in gate that return AnnotationSet
 AnnotationSet AnnotationSet.get(String type, FeatureMap constraints)
          Select annotations by type and features
 AnnotationSet AnnotationSet.get(String type, Set featureNames)
          Select annotations by type and feature names It returns all annotations of the given type that have the given set of features, regardless of their concrete values If the type == null, then select regardless of type
 AnnotationSet AnnotationSet.get(String type, FeatureMap constraints, Long offset)
          Select annotations by type, features and offset
 AnnotationSet AnnotationSet.get(Long offset)
          Select annotations by offset.
 AnnotationSet AnnotationSet.get(Long startOffset, Long endOffset)
          Select annotations by offset.
 AnnotationSet AnnotationSet.get(String type, Long startOffset, Long endOffset)
          Select annotations by offset and type.
 AnnotationSet AnnotationSet.getContained(Long startOffset, Long endOffset)
          Select annotations by offset.
 AnnotationSet SimpleAnnotationSet.get()
          Get all annotations
 AnnotationSet SimpleAnnotationSet.get(String type)
          Select annotations by type
 AnnotationSet SimpleAnnotationSet.get(Set types)
          Select annotations by a set of types.
 AnnotationSet SimpleDocument.getAnnotations()
          Get the default set of annotations.
 AnnotationSet SimpleDocument.getAnnotations(String name)
          Get a named set of annotations.
 

Uses of AnnotationSet in gate.annotation
 

Subinterfaces of AnnotationSet in gate.annotation
 interface EventAwareAnnotationSet
           
 

Classes in gate.annotation that implement AnnotationSet
 class AnnotationSetImpl
          Implementation of AnnotationSet.
 class DatabaseAnnotationSetImpl
           
 

Fields in gate.annotation declared as AnnotationSet
protected  AnnotationSet TestAnnotation.basicAS
          An annotation set
protected  AnnotationSet TestDatabaseAnnotationSet.basicAS
          An annotation set
 

Methods in gate.annotation that return AnnotationSet
 AnnotationSet AnnotationSetImpl.get()
          Get all annotations
 AnnotationSet AnnotationSetImpl.get(String type)
          Select annotations by type
 AnnotationSet AnnotationSetImpl.get(Set types)
          Select annotations by a set of types.
 AnnotationSet AnnotationSetImpl.get(String type, FeatureMap constraints)
          Select annotations by type and features This will return an annotation set containing just those annotations of a particular type (i.e. with a particular name) and which have features with specific names and values.
 AnnotationSet AnnotationSetImpl.get(String type, Set featureNames)
          Select annotations by type and feature names
 AnnotationSet AnnotationSetImpl.get(Long offset)
          Select annotations by offset.
 AnnotationSet AnnotationSetImpl.get(Long startOffset, Long endOffset)
          Select annotations by offset.
 AnnotationSet AnnotationSetImpl.getStrict(Long startOffset, Long endOffset)
          Select annotations by offset.
 AnnotationSet AnnotationSetImpl.get(String neededType, Long startOffset, Long endOffset)
          Select annotations by offset.
 AnnotationSet AnnotationSetImpl.get(String type, FeatureMap constraints, Long offset)
          Select annotations by type, features and offset
 AnnotationSet AnnotationSetImpl.getContained(Long startOffset, Long endOffset)
          Select annotations by offset that start at a position between the start and end before the end offset
 

Uses of AnnotationSet in gate.corpora
 

Fields in gate.corpora declared as AnnotationSet
protected  AnnotationSet DocumentImpl.defaultAnnots
          The default annotation set
 

Methods in gate.corpora that return AnnotationSet
 AnnotationSet DatabaseDocumentImpl.getAnnotations()
          Get the default set of annotations.
 AnnotationSet DatabaseDocumentImpl.getAnnotations(String name)
          Get a named set of annotations.
 AnnotationSet DocumentImpl.getAnnotations()
          Get the default set of annotations.
 AnnotationSet DocumentImpl.getAnnotations(String name)
          Get a named set of annotations.
 

Methods in gate.corpora with parameters of type AnnotationSet
private  List DatabaseDocumentImpl.getAnnotationsForOffset(AnnotationSet aDumpAnnotSet, Long offset)
           
private  boolean DocumentImpl.insertsSafety(AnnotationSet aTargetAnnotSet, Annotation aSourceAnnotation)
          This method verifies if aSourceAnnotation can ve inserted safety into the aTargetAnnotSet.
private  String DocumentImpl.saveAnnotationSetAsXml(AnnotationSet aDumpAnnotSet, boolean includeFeatures)
          This method saves all the annotations from aDumpAnnotSet and combines them with the document content.
private  Annotation DocumentImpl.identifyTheRootAnnotation(AnnotationSet anAnnotationSet)
          Identifies the root annotations inside an annotation set.
private  String DocumentImpl.annotationSetToXml(AnnotationSet anAnnotationSet)
          This method saves an AnnotationSet as XML.
 void DocumentImpl.setDefaultAnnotations(AnnotationSet defaultAnnotations)
          This method added by Shafirin Andrey, to allow access to protected member DocumentImpl.defaultAnnots Required for JAPE-Debugger.
static void TestDocument.verifyNodeIdConsistency(AnnotationSet annotSet, Map offests2NodeId, Document doc)
          This metod runs the test over an annotation Set.
 

Uses of AnnotationSet in gate.creole
 

Fields in gate.creole declared as AnnotationSet
private  AnnotationSet GazetteerListsCollector.allAnnots
           
 

Methods in gate.creole with parameters of type AnnotationSet
protected  void GazetteerListsCollector.collectLists(AnnotationSet annots, String annotType)
           
 

Uses of AnnotationSet in gate.creole.annotdelete
 

Methods in gate.creole.annotdelete with parameters of type AnnotationSet
private  void AnnotationDeletePR.removeAnnotationsFromCorefData(AnnotationSet annotations, String setName, Map matchesMap)
           
private  void AnnotationDeletePR.removeSubSet(AnnotationSet theSet, Map matchMap)
           
 

Uses of AnnotationSet in gate.creole.annotransfer
 

Fields in gate.creole.annotransfer declared as AnnotationSet
protected  AnnotationSet AnnotationSetTransfer.bodyAnnotations
           
 

Uses of AnnotationSet in gate.creole.coref
 

Fields in gate.creole.coref declared as AnnotationSet
private  AnnotationSet NominalCoref.defaultAnnotations
          ---
private  AnnotationSet PronominalCoref.defaultAnnotations
          ---
private  AnnotationSet PronominalCoref.Quote.antecedentsBefore
          ---
private  AnnotationSet PronominalCoref.Quote.antecedentsAfter
          ---
private  AnnotationSet PronominalCoref.Quote.antecedentsBackInContext
          ---
private  AnnotationSet PronominalCoref.Sentence.persons
          ---
private  AnnotationSet PronominalCoref.Sentence.organizations
          ---
private  AnnotationSet PronominalCoref.Sentence.locations
          ---
 

Methods in gate.creole.coref that return AnnotationSet
private  AnnotationSet PronominalCoref.Quote.generateAntecedentCandidates(int sentenceNumber, int quoteNumber, int mode)
          ---
 AnnotationSet PronominalCoref.Quote.getAntecedentCandidates(int type)
          ---
 AnnotationSet PronominalCoref.Sentence.getPersons()
          ---
 AnnotationSet PronominalCoref.Sentence.getOrganizations()
          ---
 AnnotationSet PronominalCoref.Sentence.getLocations()
          ---
 

Methods in gate.creole.coref with parameters of type AnnotationSet
private  boolean NominalCoref.overlapsAnnotations(Annotation a, AnnotationSet annotations)
          This method specifies whether a given annotation overlaps any of a set of annotations.
 

Constructors in gate.creole.coref with parameters of type AnnotationSet
PronominalCoref.Sentence(int sentNumber, int paraNumber, Long startOffset, Long endOffset, AnnotationSet persons, AnnotationSet organizations, AnnotationSet locations)
          ---
 

Uses of AnnotationSet in gate.creole.dumpingPR
 

Methods in gate.creole.dumpingPR that return AnnotationSet
protected  AnnotationSet DumpingPR.renameAnnotations(AnnotationSet annots2Export, HashMap renameMap)
           
 

Methods in gate.creole.dumpingPR with parameters of type AnnotationSet
protected  void DumpingPR.write2File(AnnotationSet exportSet)
           
protected  AnnotationSet DumpingPR.renameAnnotations(AnnotationSet annots2Export, HashMap renameMap)
           
 

Uses of AnnotationSet in gate.creole.ml
 

Fields in gate.creole.ml declared as AnnotationSet
protected  AnnotationSet MachineLearningPR.annotationSet
           
 

Uses of AnnotationSet in gate.creole.nerc
 

Constructors in gate.creole.nerc with parameters of type AnnotationSet
EntitySet(String fileName, Document document, AnnotationSet annotationSet)
          Constructs an entity set from a Gate annotation set
 

Uses of AnnotationSet in gate.creole.orthomatcher
 

Fields in gate.creole.orthomatcher declared as AnnotationSet
protected  AnnotationSet OrthoMatcher.nameAllAnnots
           
 

Methods in gate.creole.orthomatcher with parameters of type AnnotationSet
private  void OrthoMatcher.buildTables(AnnotationSet nameAllAnnots)
          Tables for namematch info (used by the namematch rules)
 

Uses of AnnotationSet in gate.email
 

Fields in gate.email declared as AnnotationSet
private  AnnotationSet EmailDocumentHandler.basicAS
           
 

Uses of AnnotationSet in gate.event
 

Constructors in gate.event with parameters of type AnnotationSet
AnnotationSetEvent(AnnotationSet source, int type, Document sourceDocument, Annotation annotation)
          Constructor.
 

Uses of AnnotationSet in gate.gui
 

Fields in gate.gui declared as AnnotationSet
protected  AnnotationSet AnnotationDiffGUI.keySet
           
protected  AnnotationSet AnnotationDiffGUI.resSet
           
(package private)  AnnotationSet DocumentEditor.HighlightAnnotationMenu.set
           
protected  AnnotationSet DocumentEditor.EditAnnotationAction.set
           
(package private)  AnnotationSet DocumentEditor.NewAnnotationAction.set
           
(package private)  AnnotationSet SchemaAnnotationEditor.currentAnnotSet
          The curent annotation set used by the editor
protected  AnnotationSet SyntaxTreeViewer.currentSet
           
protected  AnnotationSet SyntaxTreeViewer.treeAnnotations
           
(package private)  AnnotationSet UnrestrictedAnnotationEditor.currentAnnotSet
          The curent annotation set used by the editor
 

Methods in gate.gui with parameters of type AnnotationSet
static boolean STreeNode.transferAnnotations(Document doc, AnnotationSet targetAS)
          Transfers the annotations from added to the given annotation set Also, for each annotation in removed, removes it from the given annotation set Called by OkAction() in the treeViewer to finalise the changes.
 

Constructors in gate.gui with parameters of type AnnotationSet
DocumentEditor.HighlightAnnotationMenu(Annotation ann, AnnotationSet aSet)
           
DocumentEditor.EditAnnotationAction(AnnotationSet set, Annotation annotation)
           
DocumentEditor.NewAnnotationAction(AnnotationSet set, Long startOffset, Long endOffset)
           
DocumentEditor.NewAnnotationAction(AnnotationSet set, String type, Long startOffset, Long endOffset)
           
 

Uses of AnnotationSet in gate.gui.docview
 

Fields in gate.gui.docview declared as AnnotationSet
protected  AnnotationSet AnnotationEditor.set
           
(package private)  AnnotationSet AnnotationListView.AnnotationHandler.set
           
(package private)  AnnotationSet AnnotationListView.EditAnnotationAction.set
           
(package private)  AnnotationSet AnnotationSetsView.SetHandler.set
           
(package private)  AnnotationSet AnnotationSetsView.AnnotationHandler.set
           
 

Methods in gate.gui.docview that return AnnotationSet
private  AnnotationSet CorefEditor.getAnnotationSet(String annotSet)
          Returns annotation Set
 

Methods in gate.gui.docview with parameters of type AnnotationSet
 void AnnotationEditor.setAnnotation(Annotation ann, AnnotationSet set)
           
protected  void AnnotationEditor.moveAnnotation(AnnotationSet set, Annotation oldAnnotation, Long newStartOffset, Long newEndOffset)
          Changes the span of an existing annotation by creating a new annotation with the same ID, type and features but with the new start and end offsets.
 void AnnotationListView.addAnnotation(Object tag, Annotation ann, AnnotationSet set)
           
 void AnnotationListView.addAnnotations(Collection tags, Collection annotations, AnnotationSet set)
          Adds a batch of annotations in one go.
 Annotation CorefEditor.findOutTheLongestAnnotation(ArrayList matches, AnnotationSet set)
          Given arrayList containing Ids of the annotations, and an annotationSet, this method returns the annotations that has longest string among the matches
private  CorefEditor.CorefTreeNode CorefEditor.createAnnotSetNode(AnnotationSet set, boolean isDefaultSet)
           
private  CorefEditor.CorefTreeNode CorefEditor.createChain(AnnotationSet set, boolean isDefaultSet)
          Creates the internal data structure
 Object TextualDocumentView.addHighlight(Annotation ann, AnnotationSet set, Color colour)
           
 List TextualDocumentView.addHighlights(Collection annotations, AnnotationSet set, Color colour)
          Ads several highlights in one go.
 

Constructors in gate.gui.docview with parameters of type AnnotationSet
AnnotationListView.AnnotationHandler(AnnotationSet set, Annotation ann)
           
AnnotationListView.EditAnnotationAction(AnnotationSet set, Annotation ann, AnnotationVisualResource editor)
           
AnnotationSetsView.SetHandler(AnnotationSet set)
           
AnnotationSetsView.AnnotationHandler(AnnotationSet set, Annotation ann)
           
 

Uses of AnnotationSet in gate.html
 

Fields in gate.html declared as AnnotationSet
private  AnnotationSet HtmlDocumentHandler.basicAS
           
 

Constructors in gate.html with parameters of type AnnotationSet
HtmlDocumentHandler(Document aDocument, Map aMarkupElementsMap, AnnotationSet anAnnotationSet)
          Constructor initialises all the private memeber data
 

Uses of AnnotationSet in gate.jape
 

Fields in gate.jape declared as AnnotationSet
private  AnnotationSet BasicPatternElement.matchedAnnots
          The set of annotations we have matched.
 

Methods in gate.jape that return AnnotationSet
 AnnotationSet BasicPatternElement.getMatchedAnnots()
          Access to the annotations that have been matched.
 AnnotationSet ComplexPatternElement.getMatchedAnnots()
          Access to the annotations that have been matched.
 AnnotationSet ConstraintGroup.getMatchedAnnots()
          Access to the annotations that have been matched by this group.
 AnnotationSet LeftHandSide.getBoundAnnots(String bindingName)
          Get annotations via a binding name.
(package private)  AnnotationSet LeftHandSide.getMatchedAnnots()
          For debugging only.
abstract  AnnotationSet PatternElement.getMatchedAnnots()
          Access to the annotations that have been matched.
 

Methods in gate.jape with parameters of type AnnotationSet
 void Batch.transduce(Document doc, AnnotationSet inputAS, AnnotationSet outputAS)
          Process a single document.
 void MultiPhaseTransducer.transduce(Document doc, AnnotationSet input, AnnotationSet output)
          Transduce the document by running each phase in turn.
 void RhsAction.doit(Document doc, Map bindings, AnnotationSet annotations, AnnotationSet inputAS, AnnotationSet outputAS, Ontology ontology)
          Fires the RHS action for a particular LHS match.
 void RightHandSide.transduce(Document doc, Map bindings, AnnotationSet inputAS, AnnotationSet outputAS, Ontology ontology)
          Makes changes to the document, using LHS bindings.
 void Rule.transduce(Document doc, AnnotationSet inputAS, AnnotationSet outputAS)
          Apply the RHS of this rule (LHS must have been matched first).
 void SinglePhaseTransducer.transduce(Document doc, AnnotationSet inputAS, AnnotationSet outputAS)
          Transduce a document using the annotation set provided and the current rule application style.
abstract  void Transducer.transduce(Document doc, AnnotationSet inputAS, AnnotationSet outputAS)
          Transduce a document.
 

Uses of AnnotationSet in gate.persist
 

Fields in gate.persist declared as AnnotationSet
private static AnnotationSet TestPersist.sample_defaultASet
           
 

Methods in gate.persist with parameters of type AnnotationSet
protected abstract  void JDBCDataStore.createAnnotationSet(Long lrID, AnnotationSet aset)
           
protected  void JDBCDataStore._syncAddedAnnotations(Document doc, AnnotationSet as, Collection changes)
          helper for sync() - never call directly
protected  void JDBCDataStore._syncRemovedAnnotations(Document doc, AnnotationSet as, Collection changes)
          helper for sync() - never call directly
protected  void JDBCDataStore._syncChangedAnnotations(Document doc, AnnotationSet as, Collection changes)
          helper for sync() - never call directly
protected  void OracleDataStore.createAnnotationSet(Long lrID, AnnotationSet aset)
          creates an entry for annotation set in the database
protected  void PostgresDataStore.createAnnotationSet(Long lrID, AnnotationSet aset)
          creates an entry for annotation set in the database
 

Uses of AnnotationSet in gate.util
 

Methods in gate.util with parameters of type AnnotationSet
static boolean TestEqual.annotationSetsEqual(AnnotationSet as1, AnnotationSet as2)
          Two AnnotationSet are equal if their name, the documents of which belong to the AnnotationSets and annotations from the sets are the same
 

Uses of AnnotationSet in gate.xml
 

Fields in gate.xml declared as AnnotationSet
private  AnnotationSet GateFormatXmlDocumentHandler.currentAnnotationSet
          the current annotation set that is being created and filled with annotations
private  AnnotationSet XmlDocumentHandler.basicAS
          An annotation set used for creating annotation reffering the doc
 

Constructors in gate.xml with parameters of type AnnotationSet
XmlDocumentHandler(Document aDocument, Map aMarkupElementsMap, Map anElement2StringMap, AnnotationSet anAnnotationSet)
          Constructs a XmlDocumentHandler object.